PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000135389
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family HB-other
Protein Properties Length: 349aa    MW: 39490.5 Da    PI: 4.3895
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000135389genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.59.5e-08282329653
                    S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
       Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                    +++k q+e+Le +++k++ p+ ++     + ++L+ ++V  WF  +R 
  MDP0000135389 282 RLKKAQVETLEGVYRKTKRPTNAMVSSXVHVTNLPRKRVVKWFEDKRS 329
                    67899***************************************9996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.507274334IPR001356Homeobox domain
SMARTSM003890.005280338IPR001356Homeobox domain
SuperFamilySSF466892.74E-7280331IPR009057Homeodomain-like
CDDcd000861.36E-4280328No hitNo description
Gene3DG3DSA:1.10.10.602.0E-7281339IPR009057Homeodomain-like
PfamPF000463.8E-5282329IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MAFASALDTP KGLHFLPLPS SSRHERSPTN LVLPRHFPTR FSSTIALARR RNHRAEVAPS  60
RTKIKKRSLG NKEVKEVEEE DVDEDAIDAL FRLLEEDLKN DDASFDDEDL TEEELAKLEQ  120
EVAEALGVDG DDDDDEEEEE EEVEDDDGVV ESYAEEDEEV EEEEEEETPV KLKTWQMRRL  180
AAALKVGRRK TSIKTLAAEL CLDRAVVLEL LREPPPSLLI MCXXLPDEPA TVVSVSQPNS  240
VETVVETTGE TXVETTTDSV ELESAAXVPV HARQQKFSAQ KRLKKAQVET LEGVYRKTKR  300
PTNAMVSSXV HVTNLPRKRV VKWFEDKRSE DXVPDSRQPY QRPIPNTVL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008359672.10.0PREDICTED: LOW QUALITY PROTEIN: patellin-2-like
SwissprotQ8H0V54e-65OCP3_ARATH; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLM5XCV91e-131M5XCV9_PRUPE; Uncharacterized protein
STRINGVIT_04s0008g05190.t011e-98(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101813138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.14e-51overexpressor of cationic peroxidase 3